TABLE 3

Evaluation of serotype prediction by SerotypeFinder

TypingNo. (%) of genomes:
For validationWith detected genesWith consistent WGS and conventional results
O601569a (∼95)560b (∼98)
H509508 (∼100)504 (∼99)
  • a In 51 genomes, genes were found by reference mapping, and in 21 genomes, only one gene was used for prediction.

  • b Eleven predictions were ambiguous between the two O-processing genes [O118/O151(7), O164/O124, O134/O46, O90/O127, and O162/O101].