TABLE 3.

Maximal similarity values between six pairs of strains for nine different genomic regionsa

RegionSimilarity values (%) between the following pairs of strains:Paralogous conditions
L. blakesleeana CBS 100.28 and L. corymbifera CBS 100.51L. blakesleeana CBS 100.28 and L. ornata CBS 958.68L. blakesleeana CBS 100.28 and L. ramosa CBS 582.65L. corymbifera CBS 100.51 and L. ramosa CBS 582.65L. corymbifera CBS 100.51 and L. ornata CBS 958.68L. ramosa CBS 582.65 and L. ornata CBS 958.68
ITS86.082.079.281.392.481.1Polymorphism among copies (paralogs) detected in two strains only, remaining strains directly sequenced
ß-Tubulin91.290.091.288.492.488.1Several paralogs with large sequences differences, selection of coorthologous paralogs not possible
RPB2NAbNANA90.097.589.7No outparalogs detected, several inparalogs with small sequence differences
Actin91.391.094.291.696.292.1Two outparalogs in three species, several inparalogs with small sequence differences
RPB192.492.691.191.896.792.1Two outparalogs, several inparalogs with small sequence differences
LSU93.993.793.495.598.195.3Probably no polymorphism among copies (paralogs) (directly sequenced)
EF-1α94.494.194.994.097.793.0No outparalogs detected, numerous inparalogs with large sequence differences forming subclades (at least two duplications after species determination)
COI97.898.298.497.998.298.1No paralogs detected
mtSSU100100100100100100Probably no paralogs (directly sequenced)
  • a The nine different genomic regions are ITS, partial β-tubulin, partial RPB2, partial actin, partial RPB1, D1/D2 region of the LSU, partial EF-1α, partial COI, and partial mtSSU.

  • b NA, not available.