Table 1.

Probe and primer sequences for the dengue serotype specific assays

Primer or probeSequence (5′–3′)Genomic regionGenBank reference no.
DEN-1-forwardGAC ACC ACA CCC TTT GGA CAANS5 (8586–8606) M87512
DEN-1-reverseCAC CTG GCT GTC ACC TCC ATNS5 (8692–8673)
DEN-1-probeAGA GGG TGT TTA AAG AGA AAG TTG ACA CGC GNS5 (8608–8638)
DEN-2-forwardCAT GGC CCT KGT GGC GC (237–251) M29095
DEN-2-reverseCCC CAT CTY TTC AGT ATC CCT GC (305–284)
DEN-2-probeTCC TTC GTT TCC TAA CAA TCCC (254–274)
DEN-3-forwardGGG AAA ACC GTC TAT CAA TAC (118–221) M93130
DEN-3-reverseCGC CAT AAC CAA TTT CAT TGGC (241–221)
DEN-3-probeCAC AGT TGG CGA AGA GAT TCT CAA GAG GAC (174–202)
DEN-4-forwardTGA AGA GAT TCT CAA CCG GACC (187–207) M14931
DEN-4-reverseAAT CCC TGC TGT TGG TGG GC (293–275)
DEN-4-probeTCA TCA CGT TTT TGC GAG TCC TTT CCAC (247–273)