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bacteria

  • Human Bacterial Repertoire of the Urinary Tract: a Potential Paradigm Shift
    Minireview
    Human Bacterial Repertoire of the Urinary Tract: a Potential Paradigm Shift

    The aim of this article is to review the human repertoire of bacteria in urine already described by culture and metagenomic techniques and published in the literature. Our study led us to compare this repertoire with other available human repertoires.

    Aurélie Morand, Florent Cornu, Jean-Charles Dufour, Michel Tsimaratos, Jean-Christophe Lagier, Didier Raoult
  • An Update on the Novel Genera and Species and Revised Taxonomic Status of Bacterial Organisms Described in 2016 and 2017
    Minireview
    An Update on the Novel Genera and Species and Revised Taxonomic Status of Bacterial Organisms Described in 2016 and 2017

    Recognition and acknowledgment of novel bacterial taxonomy and nomenclature revisions can impact clinical practice, disease epidemiology, and routine clinical microbiology laboratory operations. The Journal of Clinical Microbiology (JCM) herein presents its biannual report summarizing such changes published in the years 2016 and 2017, as published and added by the International Journal of Systematic and...

    Erik Munson, Karen C. Carroll
  • Comprehensive Evaluation of Compendial USP<71>, BacT/Alert Dual-T, and Bactec FX for Detection of Product Sterility Testing Contaminants
    Bacteriology
    Comprehensive Evaluation of Compendial USP<71>, BacT/Alert Dual-T, and Bactec FX for Detection of Product Sterility Testing Contaminants

    The emergence of cell therapy programs in large academic centers has led to an increasing demand for clinical laboratories to assist with product sterility testing. Automated blood culture systems have shown promise as alternatives to the manual USP<71> compendial method, but current published data are limited by small organism test sets, particularly for molds.

    Matthew R. England, Frida Stock, James E. T. Gebo, Karen M. Frank, Anna F. Lau
  • Minireview
    Matrix-Assisted Laser Desorption Ionization–Time of Flight Mass Spectrometry for Use with Positive Blood Cultures: Methodology, Performance, and Optimization
    Matthew L. Faron, Blake W. Buchan, Nathan A. Ledeboer
  • Open Access
    Bacteriology
    Safety and Accuracy of Matrix-Assisted Laser Desorption Ionization–Time of Flight Mass Spectrometry for Identification of Highly Pathogenic Organisms
    James T. Rudrik, Marty K. Soehnlen, Michael J. Perry, Maureen M. Sullivan, Wanda Reiter-Kintz, Philip A. Lee, Denise Pettit, Anthony Tran, Erin Swaney
  • Open Access
    Bacteriology
    Validation and Implementation of Clinical Laboratory Improvements Act-Compliant Whole-Genome Sequencing in the Public Health Microbiology Laboratory
    Varvara K. Kozyreva, Chau-Linda Truong, Alexander L. Greninger, John Crandall, Rituparna Mukhopadhyay, Vishnu Chaturvedi
  • Bacteriology
    Analysis of MIC and Disk Diffusion Testing Variables for Gepotidacin and Comparator Agents against Select Bacterial Pathogens
    L. M. Koeth, J. M. DiFranco-Fisher, N. E. Scangarella-Oman, L. A. Miller
  • Bacteriology
    Direct Detection and Identification of Bacterial Pathogens from Urine with Optimized Specimen Processing and Enhanced Testing Algorithm
    Bin Huang, Lei Zhang, Weizheng Zhang, Kang Liao, Shihong Zhang, Zhiquan Zhang, Xingyan Ma, Jialong Chen, Xiuhong Zhang, Pinghua Qu, Shangwei Wu, Cha Chen, Yi-Wei Tang
  • Minireview
    What's in a Name? New Bacterial Species and Changes to Taxonomic Status from 2012 through 2015
    Erik Munson, Karen C. Carroll
  • Bacteriology
    Fast Detection of Volatile Organic Compounds from Bacterial Cultures by Secondary Electrospray Ionization-Mass Spectrometry
    Jiangjiang Zhu, Heather D. Bean, Yin-Ming Kuo, Jane E. Hill

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