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enterovirus

  • Biennial Upsurge and Molecular Epidemiology of Enterovirus D68 Infection in New York, USA, 2014 to 2018
    Virology
    Biennial Upsurge and Molecular Epidemiology of Enterovirus D68 Infection in New York, USA, 2014 to 2018

    Enterovirus D68 (EV-D68) infection has been associated with outbreaks of severe respiratory illness and increased cases of nonpolio acute flaccid myelitis. The patterns of EV-D68 circulation and molecular epidemiology are not fully understood. In this study, nasopharyngeal (NP) specimens collected from patients in the Lower Hudson Valley, New York, from 2014 to 2018 were examined for rhinovirus/enterovirus (RhV/EV) by the FilmArray...

    Victoria L. Gilrane, Jian Zhuge, Weihua Huang, Sheila M. Nolan, Abhay Dhand, Changhong Yin, Christian Salib, Faariah Shakil, Helen Engel, John T. Fallon, Guiqing Wang
  • Open Access
    Rapid and Sensitive Direct Detection and Identification of Poliovirus from Stool and Environmental Surveillance Samples by Use of Nanopore Sequencing
    Virology
    Rapid and Sensitive Direct Detection and Identification of Poliovirus from Stool and Environmental Surveillance Samples by Use of Nanopore Sequencing

    Global poliovirus surveillance involves virus isolation from stool and environmental samples, intratypic differential (ITD) by PCR, and sequencing of the VP1 region to distinguish vaccine (Sabin), vaccine-derived, and wild-type polioviruses and to ensure an appropriate response. This cell culture algorithm takes 2 to 3 weeks on average between sample receipt and sequencing. Direct detection of viral RNA using PCR allows faster detection...

    Alexander G. Shaw, Manasi Majumdar, Catherine Troman, Áine O’Toole, Blossom Benny, Dilip Abraham, Ira Praharaj, Gagandeep Kang, Salmaan Sharif, Muhammad Masroor Alam, Shahzad Shaukat, Mehar Angez, Adnan Khurshid, Nayab Mahmood, Yasir Arshad, Lubna Rehman, Ghulam Mujtaba, Ribqa Akthar, Muhammad Salman, Dimitra Klapsa, Yara Hajarha, Humayun Asghar, Ananda Bandyopadhyay, Andrew Rambaut, Javier Martin, Nicholas Grassly
  • Point-Counterpoint
    Point-Counterpoint: Meningitis/Encephalitis Syndromic Testing in the Clinical Laboratory
    Jennifer Dien Bard, Kevin Alby
  • Open Access
    Virology
    Detection of Emerging Vaccine-Related Polioviruses by Deep Sequencing
    Malaya K. Sahoo, Marisa Holubar, ChunHong Huang, Alisha Mohamed-Hadley, Yuanyuan Liu, Jesse J. Waggoner, Stephanie B. Troy, Lourdes Garcia-Garcia, Leticia Ferreyra-Reyes, Yvonne Maldonado, Benjamin A. Pinsky
  • Letter to the Editor
    Utility of FilmArray Meningitis/Encephalitis Panel during Outbreak of Brainstem Encephalitis Caused by Enterovirus in Catalonia in 2016
    Cristian Launes, Didac Casas-Alba, Claudia Fortuny, Ana Valero-Rello, Maria Cabrerizo, Carmen Muñoz-Almagro
  • Letter to the Editor
    Universal PCR Primers Are Critical for Direct Sequencing-Based Enterovirus Genotyping
    Baoming Liu
  • Letter to the Editor
    Reply to “Universal PCR Primers Are Critical for Direct Sequencing-Based Enterovirus Genotyping”
    Coretta C. Van Leer-Buter, Randy Poelman, Renze Borger, Hubert G. M. Niesters
  • Virology
    Molecular Identification and Analysis of Nonserotypeable Human Enteroviruses
    Fei Zhou, Fanrong Kong, Kenneth McPhie, Mala Ratnamohan, Gwendolyn L. Gilbert, Dominic E. Dwyer
  • Virology
    Enhanced Detection of Enteroviruses in Clinical Samples by Reverse Transcription-PCR Using Complementary Locked Primer Technology
    JiYoung Hong, Byunghak Kang, Ahyoun Kim, Seoyoun Hwang, Sunwha Lee, Jonghyen Kim, Hyun-Young Lee, Sang-Hyeon Kang, Doo-Sung Cheon
  • Virology
    Screening Respiratory Samples for Detection of Human Rhinoviruses (HRVs) and Enteroviruses: Comprehensive VP4-VP2 Typing Reveals High Incidence and Genetic Diversity of HRV Species C
    A. Wisdom, E. C. McWilliam Leitch, E. Gaunt, H. Harvala, P. Simmonds

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